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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914182.1_cds_XP_016464200.1_57262
CDS Infomation

[gene=LOC107787181] [db_xref=GeneID:107787181] [protein=anthocyanidin 3-O-glucosyltransferase 5-like] [protein_id=XP_016464200.1] [location=complement(join(6676..7332,8263..9045))] [gbkey=CDS]
Sequence

ATGGATAGATCACAGCTTCATATTGCTATACTCTCAAGCCCTGGAATGGGTCATTTAATC
CCAGTTCTAGTCTTAGGCAACCGATTAGCCACTCACCATAACATCAAAATTACAATTCTT
GCTATCACAACCAGCTCTTCTTCAGCAGAAACCGAATTTCTCAAGAAATCCACTCTCACC
AATGAGAAAAAAACTATAGAAATAATCCCTATTCCTTCAGTCGATATTTCCCACCTAATA
AATTCCAGCACTAAAGTTTTCACTCAATTACGACTATTGGTCCGCGAAGCCTTGCCCAAA
ATTCATTGCACTATAGCTTCCATGACTCATCGTCCAGATGCTTTAATTGTCGACATTTTT
TGCACACAAATATTGCCGATTGCTGAAGAATTTAACATTTTTAAGTACGCGTACCATCCA
ACTACTGCGTGGACATTAGCGTTAGCTCTATATTGTCAAGTTTTTGACAAAGAAATTGAG
GGTGAATATGTTGATCTTAAAGAGCCTTTGAAAATTCCAGGTTGCAAAGCACTGCGACCT
GATGACGTGGTGGATCCATTGCTTGATCGGAGTGATCAGCAGTATGAAGAGTATGTTAAG
CTAGGATTGGAATACGCAGCTTTTGATGGAATCTTGATTAATACTTGGGAAGATTTAGAA
CCTGAGACTATTAAAGCACTTCGAAATAATGAGAAATTGAGATCGGTACTAAAGGTTCCT
GTTTTTCCAATATTTCCAGTTGGTCCCTTGAGGAGAACAGTTGAAACAACTGAACGTGAT
GAGGTGATTAAATGGTTAGACAAGCAAAATCATGGGTCAGTTCTATATGTATCTTTTGGA
AGTGGTGGAACACTTTCAACTAAGCAAATGACCGAGCTTGCATGGGGTTTAGAATTAAGC
CAACAGAAATTTGTTTGGGTTGTACGTCCCCCGTCCGACGGTGATGCAGATAGTGCCTAT
CTAAACTCTACCGGAAAAGAGACACGTGGCATGCCGGGATACTTGCCGGAAGGGTTCTTA
ACTAGGACTAATGAGATGGGCTTAGTAGTGCCTATGTGGGCCAAACAAGTCGAAATTTTG
GGCCACTCATCGGTGGGTGGCTTTTTGACTCATTGTGGATGGAATTCAACGGTGGAGAGC
TTGACCAATGGAGTTCCTATGATTGCATGGCCATTATATGCTGAACAAAAAATGAACGCC
GCCATGTTGACGGAGGAGCTAGGGGTGGCGATTCGGCCGGAGGTTTTGCCGACGAAGGTG
GTGAAGAGAGAGGAGATAGAGGGAATGGTGAGAATGTTGATGTACACGAAAGAAGGAAAG
ACTATAAGGGAAAAGGCTAAGAAATTAAAGAAGAGTGCGGAAAATGCACTAAGTGATGGA
GGTTCATCTTACAATTCCATTTATGAGCTTGTGAAGGATATTCGGAGTAGATTGTTATAA

Peptide Sequence

PEP ID

XP_016464200.1
PEP Infomation

PREDICTED: anthocyanidin 3-O-glucosyltransferase 5-like [Nicotiana tabacum]
Sequence

MDRSQLHIAILSSPGMGHLIPVLVLGNRLATHHNIKITILAITTSSSSAETEFLKKSTLT
NEKKTIEIIPIPSVDISHLINSSTKVFTQLRLLVREALPKIHCTIASMTHRPDALIVDIF
CTQILPIAEEFNIFKYAYHPTTAWTLALALYCQVFDKEIEGEYVDLKEPLKIPGCKALRP
DDVVDPLLDRSDQQYEEYVKLGLEYAAFDGILINTWEDLEPETIKALRNNEKLRSVLKVP
VFPIFPVGPLRRTVETTERDEVIKWLDKQNHGSVLYVSFGSGGTLSTKQMTELAWGLELS
QQKFVWVVRPPSDGDADSAYLNSTGKETRGMPGYLPEGFLTRTNEMGLVVPMWAKQVEIL
GHSSVGGFLTHCGWNSTVESLTNGVPMIAWPLYAEQKMNAAMLTEELGVAIRPEVLPTKV
VKREEIEGMVRMLMYTKEGKTIREKAKKLKKSAENALSDGGSSYNSIYELVKDIRSRLL

Transcript Sequence

Gene sequence data has not been registered.